Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015858552.1_cds_XP_016513967.1_26464
CDS Infomation

[gene=LOC107830823] [db_xref=GeneID:107830823] [protein=splicing factor U2AF-associated protein 2-like] [protein_id=XP_016513967.1] [location=complement(join(6557..6683,7147..7238,8393..8473,8855..8931,10743..10823,10979..11081,11183..11272,11929..11967,12094..12186,12421..12642,12914..13104,13203..13337,13651..13764,15572..15623))] [gbkey=CDS]
Sequence

ATGGCATCAATTGATGCCTCTGAAAATCATCTTCCTCAACAATATAACGCAGGTGAAGGC
AACAGTAGTTTGTATACAACTTCTGGAATGAGCACTGGATTGGGTTGGTATGTGCTTGCA
CAAGACCAACAGCAGCTAGGCCCATATACGATACCTGAGTTGCGTGAGCACTACTCTGCT
GGATACCTACTGGAGAATACACTTGTATGGTCAGAAGGAAAGAGTGATTGGCAACCACTT
TGCTCGATTCCTGGATTGCTAACTGATGTACCTGAGCAGAGCACTGATGGTACAAATTCA
GGTCCTTTGACTTCTAATGATCCATTGGATGAGTATGAAAAGTTTCAAAAGGAAGTGAAA
GAGGCGGAGGATGAGCAAGTAGTTGATGAGGAACAAAGGCCTTCAACTCCTCCAGATGGT
GAAGAGGAGTTCACTGATGATGATGGAACTAGGTACAAGTGGGATAAAGCTCTTAAAGTT
TGGGTACCTCAGGAAGATCCAACCGAGAAAAATGAGTATGGTCTAGAAGATATGACTTAC
GCTGAAGAAGAGGAACTTTTCCCAACTTTGCCCACTGACGATTCTTCTGGAAATGAGAAC
AAGAGCATGGATAACATTGAAGCTGATAAGACTGCTGGAGATTCAACTGAAACCACAGCG
GCGACACATAATGGCAAGAGAAAACTGCCTGAAACAGATGATTCTGAAAAGAAGGAAGCG
AATAAACCTCCAGATAGCTGGTTCGAATTAAAAGTCAATACTCATGTCTATATTGCAGGA
TTGCCAGAAGATGTCACTGTTGACGAGGTGGTTGAAGTCTTTTCAAAGTGCGGGATCATA
AAGGAGGATCCAGAAACACAAAAGCCTCGAGTGAAGATTTATTTTGACAAAGAAACTGGA
AGGAAGAAGGGCGATGCACTTGTTACATACCTTAAGGAACCTTCAGTTGATCTAGCCATT
AAAATTTTGGATGGCGCACCTTTACGCCCAGGTGACAAAATCCCTATGACAGTTACACAA
GCAAAGTTTGAGCAAAAAGGGGAAAGGTTCATACCCAAGAACGTGGACAAGAAGAAGAAG
AAGAAACTCCAAAAAGTTGAGCATAAGATGCTTGGCTGGGGTGGTCGGGATGACGCAAAG
ATATTGGTTCCAGCTACTGTTTTGCTTCGCTACATGTTCACACCAGCTGAATTGCGGGAG
GATGAGCATTTATGCTCCGAACTACAGCAGGACGTCCAAGAAGAGTGTTCAAAGTTTGGC
CCAGTGGACTTAGTAAAGGTGTGCGAAAATCATCCACAAGGGGTTGTTTTGGTCAAATTT
AAGGATAGAAGGGATGCACATAGGTGCATTGAGGCGATGAATGGACGCTGGTTTGCTGGT
CGGCAAATCCATGCTTGTGAGGATGATGGATCTGTTAACCATGCTTTAGTCCGAGATATA
GATGAAGAAACTGATAGATTAGAGAAGTTTGGAGCTGAACTCGAAGCTGATTCATAG

Peptide Sequence

PEP ID

XP_016513967.1
PEP Infomation

PREDICTED: splicing factor U2AF-associated protein 2-like [Nicotiana tabacum]
Sequence

MASIDASENHLPQQYNAGEGNSSLYTTSGMSTGLGWYVLAQDQQQLGPYTIPELREHYSA
GYLLENTLVWSEGKSDWQPLCSIPGLLTDVPEQSTDGTNSGPLTSNDPLDEYEKFQKEVK
EAEDEQVVDEEQRPSTPPDGEEEFTDDDGTRYKWDKALKVWVPQEDPTEKNEYGLEDMTY
AEEEELFPTLPTDDSSGNENKSMDNIEADKTAGDSTETTAATHNGKRKLPETDDSEKKEA
NKPPDSWFELKVNTHVYIAGLPEDVTVDEVVEVFSKCGIIKEDPETQKPRVKIYFDKETG
RKKGDALVTYLKEPSVDLAIKILDGAPLRPGDKIPMTVTQAKFEQKGERFIPKNVDKKKK
KKLQKVEHKMLGWGGRDDAKILVPATVLLRYMFTPAELREDEHLCSELQQDVQEECSKFG
PVDLVKVCENHPQGVVLVKFKDRRDAHRCIEAMNGRWFAGRQIHACEDDGSVNHALVRDI
DEETDRLEKFGAELEADS

Transcript Sequence

Gene sequence data has not been registered.